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Welcome visitor you can login or create an account. Ferret was developed as a straightforward Java application to be accessible even for non-specialists who are not adept at bioinformatics. The population size does not significantly impact Ferret runtimes. For a 1Mb locus, 14MB and 311MB disc space would be necessary for CEU and all individuals, respectively.
We encourage user community feedback to elicit new features. Ferret: a user-friendly Java tool to extract data from the 1000 Genomes project. 2016, November 23 Ferret was updated due to the recent NCBI security switch to HTTPS only. Possibility to set a MAF threshold for variants to output. Retrieves allelic frequency from the Exome Sequencing Project. 2013, October 23 This initial version corresponds to the version presented at the ASHG 2013 meeting, allowing to retrieve 1KG data from a locus of interest. Option to specify the 1000 Genomes .
Which Java version does Ferret require to run on my computer? Which Ferret version do I have on my computer? How do I get the latest Ferret update? Why is my gene or my variant not retrieved by Ferret? How do I get the allelic frequencies in two different populations?
How do I input more than one gene? How do I input more than one SNP? What 1000 Genomes version does Ferret query? What human genome version does Ferret expect?